BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021E07SP1|AL427776
(934 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1080 1243 0.0
3x_Contig1247 256 6e-68
>3x_Contig1080
Length = 4249
Score = 1243 bits (622), Expect = 0.0
Identities = 658/674 (97%), Gaps = 2/674 (0%)
Strand = Plus / Minus
Query: 1 gatcttttggacttcctcattagccaaagaaaaactaaagatatcttgcgcttgttggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gatcttttggacttcctcattagccaaagaaaaactaaagatatcttgcgcttgttggat 624
Query: 61 cctttcgatcttcgaagacgtagttactggcaagattccacgctcatagacccatgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cctttcgatcttcgaagacgtagttactggcaagattccacgctcatagacccatgataa 564
Query: 121 caagatttgagcctcactcttgttatacttctttgacaattcagcgatatattggtaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 caagatttgagcctcactcttgttatacttctttgacaattcagcgatatattggtaaaa 504
Query: 181 mggtagcttatcagcatcttctggtcttctttgcaaaggacctaatggtgagtaggcctc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aggtagcttatcagcatcttctggtcttctttgcaaaggacctaatggtgagtaggcctc 444
Query: 241 aagtaaaataccattcttttgactgamttcaacaataccgggagtttgattttgcaagan 300
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 443 aagtaaaataccattcttttgactgaattcaacaataccgggagtttgattttgcaagaa 384
Query: 301 tggagagaattcaatttggttcacctgcggtttaacctctgccactgcmagchatttctc 360
|||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||
Sbjct: 383 tggagagaattcaatttggtctccctgcggtttaacctctgccactgcaagcaatttctc 324
Query: 361 caaat-cttttacagcaaagtttgahacaccgatgttcttagcctttccagacttgtata 419
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 323 caaatgcttttacagcaaagtttgaaacaccgatgttcttagcctttccagacttgtata 264
Query: 420 gttcttccaaatacttccaattagcctcgacatccaatttgctttccttaattat-dggr 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 263 gttcttccaaatacttccaattagcctcgacatccaatttgctttccttaattataggga 204
Query: 479 gagtgcaatagatacaagtccacgtaatcaacaccgagcttcttcaatgatgtctctnag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 203 gagtgcaatagatacaagtccacgtaatcaacaccgagcttcttcaatgatgtctctaag 144
Query: 539 gcaactttagggttctcagaaagctgtttcaaagtagaatacttgtcagtgatgaagatt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gcaactttagggttctcagaaagctgtttcaaagtagaatacttgtcagtgatgaagatt 84
Query: 599 tcatctcttggcttctttgtatccttcadagcggcacccaattcaggataagttctgtat 658
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 83 tcatctcttggcttctttgtatccttcaaagcggcacccaattcaggataagttctgtat 24
Query: 659 atctctgcmgcatc 672
|||||||| |||||
Sbjct: 23 atctctgcagcatc 10
>3x_Contig1247
Length = 7218
Score = 256 bits (128), Expect = 6e-68
Identities = 308/370 (83%), Gaps = 1/370 (0%)
Strand = Plus / Plus
Query: 565 tttcaaagtagaatacttgtcagtgatgaagatttcatctcttggcttctttgtatcctt 624
||||||| || ||||||| ||| | || || |||||||||| | ||||||| |||||||
Sbjct: 237 tttcaaattataatacttttcatttattaatatttcatctcatttcttctttttatcctt 296
Query: 625 cadagcggcacccaattcaggataagttctgtatatctctgcmgcatcaatgtgcacaac 684
|| | | |||||||| || |||| |||| |||||| || | || |||| | ||||||
Sbjct: 297 caaatcttcacccaatacattataatttctttatatcacttcatcaccaattttcacaac 356
Query: 685 acctgggacagtatccaatgttttcttcacaatatcaaccaatggttgggagawagtggc 744
|||| ||| |||||||| ||||||||||||||||||||||| || | | | | |
Sbjct: 357 accttttacattatccaattttttcttcacaatatcaaccaattttttttataaattttc 416
Query: 745 atctgtctcctcgcttttgtaccaagcagtacctgtacctacaatagcaactgcaggaat 804
|||| ||||||| ||||| |||||| || ||||| ||||||||||| ||||| || |||
Sbjct: 417 atctttctcctctcttttttaccaatcattacctttacctacaatatcaacttcattaat 476
Query: 805 cttatttccattagacaaagtaaagaacttttgagtagtcatgatattaattatwagcct 864
||||||||||||| ||||| |||| ||||||| | || |||| ||||||||||| |||||
Sbjct: 477 cttatttccattatacaaattaaataactttttattattcattatattaattataagcct 536
Query: 865 ggtgaacctgatgaatgtggtttccgacggtgtgggaatgcttattagtgttgaatgaag 924
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 537 ggtgaacctgatgaatgtggtttccgacggtgt-ggaatgcttattagtgttgaatgaag 595
Query: 925 twacaattga 934
| ||||||||
Sbjct: 596 taacaattga 605
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6476
Number of Sequences: 1807
Number of extensions: 6476
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 2
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)